LOCUS AAV2_hSyn_oChIEF_m 6402 bp ds-DNA circular 29-JUN-2011 DEFINITION . ACCESSION VERSION SOURCE . ORGANISM . COMMENT COMMENT ApEinfo:methylated:1 FEATURES Location/Qualifiers misc_feature 570..1041 /label=hSyn /ApEinfo_fwdcolor=#a3ff98 /ApEinfo_revcolor=green misc_feature 2905..3509 /label=WPRE /ApEinfo_fwdcolor=#47ff46 /ApEinfo_revcolor=green misc_feature 1065..1070 /label=AgeI /ApEinfo_fwdcolor=#ff8000 /ApEinfo_revcolor=green misc_feature 4724..5583 /label=Amp /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=green misc_feature 378..509 /label=5'ITR /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=green misc_feature 3831..3961 /label=3' ITR /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=green misc_feature 1072..1080 /label=Kozak sequence /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=green misc_feature 4143..4460 /label=f1 origin /ApEinfo_fwdcolor=#ff8000 /ApEinfo_revcolor=green misc_feature 3548..3760 /label=SV40 polyA /ApEinfo_fwdcolor=#996633 /ApEinfo_revcolor=green misc_feature 1075..2151 /label=oChIEF /ApEinfo_fwdcolor=#ff9da9 /ApEinfo_revcolor=green misc_feature 2158..2874 /label=Citrine /ApEinfo_fwdcolor=#efff00 /ApEinfo_revcolor=green misc_feature 1059..1064 /label=BamHI /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=green misc_feature 2152..2157 /label=XhoI /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=green misc_feature 2899..2904 /label=HindIII /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=green misc_feature 2878..2883 /label=NheI /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=green misc_feature 2887..2892 /label=EcoRI /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=green misc_feature 1040..1045 /label=EcoRI(1) /ApEinfo_label=EcoRI /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=green ORIGIN 1 ttctttcctg cgttatcccc tgattctgtg gataaccgta ttaccgcctt tgagtgagct 61 gataccgctc gccgcagccg aacgaccgag cgcagcgagt cagtgagcga ggaagcggaa 121 gagcgcccaa tacgcaaacc gcctctcccc gcgcgttggc cgattcatta atgcagctgg 181 cacgacaggt ttcccgactg gaaagcgggc agtgagcgca acgcaattaa tgtgagttag 241 ctcactcatt aggcacccca ggctttacac tttatgcttc cggctcgtat gttgtgtgga 301 attgtgagcg gataacaatt tcacacagga aacagctatg accatgatta cgccagattt 361 aattaaggcc ttaattaggc tgcgcgctcg ctcgctcact gaggccgccc gggcaaagcc 421 cgggcgtcgg gcgacctttg gtcgcccggc ctcagtgagc gagcgagcgc gcagagaggg 481 agtggccaac tccatcacta ggggttcctt gtagttaatg attaacccgc catgctactt 541 atctacgtag ccatgctcta ggaAGATCTc tgcagagggc cctgcgtatg agtgcaagtg 601 ggttttagga ccaggatgag gcggggtggg ggtgcctacc tgacgaccga ccccacccac 661 tggacaagca cccaaccccc attccccaaa ttgcgcatcc cctatcagag agggggaggg 721 gaaacaggat gcggcgaggc gcgtgcgcac tgccagcttc agcaccgcgg acagtgcctt 781 cgcccccgcc tggcggcgcg cgccaccgcc gcctcagcac tgaaggcgcg ctgacgtcac 841 tcgccggtcc cccgcaaact ccccttcccg gccaccttgg tcgcgtccgc gccgccgccg 901 gcccagccgg accgcaccac gcgaggcgcg agataggggg gcacgggcgc gaccatctgc 961 gctgcggcgc cggcgactca gcgctgcctc agtctgcggt gggcagcgga ggagtcgtgt 1021 cgtgcctgag agcgcagtcg aattcaagct gctagcaagg atccACCGGT GACCATGGTG 1081 AGCAGAAGAC CCTGGCTGCT GGCCCTGGCC CTGGCCGTGG CCCTGGCCGC CGGCAGCGCC 1141 GGCGCCAGCA CCGGCAGCGA CGCCACCGTG CCCGTGGCCA CCCAGGACGG CCCCGACTAC 1201 GTGTTCCACA GAGCCCACGA GAGAATGCTG TTCCAGACCA GCTACACCCT GGAGAACAAC 1261 GGCAGCGTGA TCTGCATCCC CAACAACGGC CAGTGCTTCT GCCTGGCCTG GCTGAAGAGT 1321 AACGGCACCA ACGCCGAGAA GCTGGCCGCC AACATCCTGC AGTGGATCAC CTTCGCCCTG 1381 AGCGCCCTGT GCCTGATGTT CTACGGCTAC CAGACCTGGA AGAGTACCTG CGGCTGGGAG 1441 GAGATCTACG TGGCCACCAT CGAGATGATC AAGTTCATCA TAGAGTACTT CCACGAGTTC 1501 GACGAGCCCG CCGTGATCTA CAGCAGCAAC GGCAACAAGA CCGTGTGGCT GAGATACGCC 1561 GAGTGGCTGC TGACCTGCCC CGTGGTCCTG ATCCACCTGA GCAACCTGAC CGGCCTGGCC 1621 AACGACTACA ACAAGAGAAC CATGGGCCTG CTGGTGAGCG ACATCGGCAC CATCGTGTGG 1681 GGCACCACCG CCGCCCTGAG CAAGGGCTAC GTGAGAGTGA TCTTCTTCCT GATGGGCCTG 1741 TGCTACGGCA TCTACACCTT CTTCAACGCC GCCAAGGTGT ACATCGAGGC CTACCACACC 1801 GTGCCCAAGG GCAGATGCAG ACAGGTGGTG ACCGGCATGG CCTGGCTGTT CTTCGTGAGC 1861 TGGGGCATGT TCCCCATCCT GTTCATCCTG GGCCCCGAGG GCTTCGGCGT GCTGAGCGTG 1921 TACGGCAGCA CCGTGGGCCA CACCATCATC GACCTGATGA GCAAGAACTG CTGGGGCCTG 1981 CTGGGCCACT ACCTGAGAGT GCTGATCCAC GAGCACATCC TGATCCACGG CGACATCAGA 2041 AAGACCACCA AGCTGAACAT CGGCGGCACC GAGATCGAGG TGGAGACCCT GGTGGAGGAC 2101 GAGGCCGAGG CCGGCGCCGT GAACAAGGGC ACCGGCAAGT ACGAGAGCAG CCTCGAGatg 2161 gtgagcaagg gcgaggagct gttcaccggg gtggtgccca tcctggtcga gctggacggc 2221 gacgtaaacg gccacaagtt cagcgtgtcc ggcgagggcg agggcgatgc cacctacggc 2281 aagctgaccc tgaagttcat ctgcaccacc ggcaagctgc ccgtgccctg gcccaccctc 2341 gtgaccacct tcggctacgg cctgatgtgc ttcgcccgct accccgacca catgaagcag 2401 cacgacttct tcaagtccgc catgcccgaa ggctacgtcc aggagcgcac catcttcttc 2461 aaggacgacg gcaactacaa gacccgcgcc gaggtgaagt tcgagggcga caccctggtg 2521 aaccgcatcg agctgaaggg catcgacttc aaggaggacg gcaacatcct ggggcacaag 2581 ctggagtaca actacaacag ccacaacgtc tatatcatgg ccgacaagca gaagaacggc 2641 atcaaggtga acttcaagat ccgccacaac atcgaggacg gcagcgtgca gctcgccgac 2701 cactaccagc agaacacccc catcggcgac ggccccgtgc tgctgcccga caaccactac 2761 ctgagctacc agtccgccct gagcaaagac cccaacgaga agcgcgatca catggtcctg 2821 ctggagttcg tgaccgccgc cgggatcact ctcggcatgg acgagctgta caagTAGGCT 2881 AGCcccgaat tcgatatcaa gcttatcgat aatcaacctc tggattacaa aatttgtgaa 2941 agattgactg gtattcttaa ctatgttgct ccttttacgc tatgtggata cgctgcttta 3001 atgcctttgt atcatgctat tgcttcccgt atggctttca ttttctcctc cttgtataaa 3061 tcctggttgc tgtctcttta tgaggagttg tggcccgttg tcaggcaacg tggcgtggtg 3121 tgcactgtgt ttgctgacgc aacccccact ggttggggca ttgccaccac ctgtcagctc 3181 ctttccggga ctttcgcttt ccccctccct attgccacgg cggaactcat cgccgcctgc 3241 cttgcccgct gctggacagg ggctcggctg ttgggcactg acaattccgt ggtgttgtcg 3301 gggaaatcat cgtcctttcc ttggctgctc gcctgtgttg ccacctggat tctgcgcggg 3361 acgtccttct gctacgtccc ttcggccctc aatccagcgg accttccttc ccgcggcctg 3421 ctgccggctc tgcggcctct tccgcgtctt cgccttcgcc ctcagacgag tcggatctcc 3481 ctttgggccg cctccccgca tcgataccgt cgacctcgac ccgggcggcc gcttcgagca 3541 gacatgataa gatacattga tgagtttgga caaaccacaa ctagaatgca gtgaaaaaaa 3601 tgctttattt gtgaaatttg tgatgctatt gctttatttg taaccattat aagctgcaat 3661 aaacaagtta acaacaacaa ttgcattcat tttatgtttc aggttcaggg ggagatgtgg 3721 gaggtttttt aaagcaagta aaacctctac aaatgtggta aaatcgataa ggatcttcct 3781 agagcatggc tacgtagata agtagcatgg cgggttaatc attaactaca aggaacccct 3841 agtgatggag ttggccactc cctctctgcg cgctcgctcg ctcactgagg ccgggcgacc 3901 aaaggtcgcc cgacgcccgg gctttgcccg ggcggcctca gtgagcgagc gagcgcgcag 3961 ccttaattaa cctaattcac tggccgtcgt tttacaacgt cgtgactggg aaaaccctgg 4021 cgttacccaa cttaatcgcc ttgcagcaca tccccctttc gccagctggc gtaatagcga 4081 agaggcccgc accgatcgcc cttcccaaca gttgcgcagc ctgaatggcg aatgggacgc 4141 gccctgtagc ggcgcattaa gcgcggcggg tgtggtggtt acgcgcagcg tgaccgctac 4201 acttgccagc gccctagcgc ccgctccttt cgctttcttc ccttcctttc tcgccacgtt 4261 cgccggcttt ccccgtcaag ctctaaatcg ggggctccct ttagggttcc gatttagtgc 4321 tttacggcac ctcgacccca aaaaacttga ttagggtgat ggttcacgta gtgggccatc 4381 gccctgatag acggtttttc gccctttgac gttggagtcc acgttcttta atagtggact 4441 cttgttccaa actggaacaa cactcaaccc tatctcggtc tattcttttg atttataagg 4501 gattttgccg atttcggcct attggttaaa aaatgagctg atttaacaaa aatttaacgc 4561 gaattttaac aaaatattaa cgcttacaat ttaggtggca cttttcgggg aaatgtgcgc 4621 ggaaccccta tttgtttatt tttctaaata cattcaaata tgtatccgct catgagacaa 4681 taaccctgat aaatgcttca ataatattga aaaaggaaga gtatgagtat tcaacatttc 4741 cgtgtcgccc ttattccctt ttttgcggca ttttgccttc ctgtttttgc tcacccagaa 4801 acgctggtga aagtaaaaga tgctgaagat cagttgggtg cacgagtggg ttacatcgaa 4861 ctggatctca acagcggtaa gatccttgag agttttcgcc ccgaagaacg ttttccaatg 4921 atgagcactt ttaaagttct gctatgtggc gcggtattat cccgtattga cgccgggcaa 4981 gagcaactcg gtcgccgcat acactattct cagaatgact tggttgagta ctcaccagtc 5041 acagaaaagc atcttacgga tggcatgaca gtaagagaat tatgcagtgc tgccataacc 5101 atgagtgata acactgcggc caacttactt ctgacaacga tcggaggacc gaaggagcta 5161 accgcttttt tgcacaacat gggggatcat gtaactcgcc ttgatcgttg ggaaccggag 5221 ctgaatgaag ccataccaaa cgacgagcgt gacaccacga tgcctgtagc aatggcaaca 5281 acgttgcgca aactattaac tggcgaacta cttactctag cttcccggca acaattaata 5341 gactggatgg aggcggataa agttgcagga ccacttctgc gctcggccct tccggctggc 5401 tggtttattg ctgataaatc tggagccggt gagcgtgggt ctcgcggtat cattgcagca 5461 ctggggccag atggtaagcc ctcccgtatc gtagttatct acacgacggg gagtcaggca 5521 actatggatg aacgaaatag acagatcgct gagataggtg cctcactgat taagcattgg 5581 taactgtcag accaagttta ctcatatata ctttagattg atttaaaact tcatttttaa 5641 tttaaaagga tctaggtgaa gatccttttt gataatctca tgaccaaaat cccttaacgt 5701 gagttttcgt tccactgagc gtcagacccc gtagaaaaga tcaaaggatc ttcttgagat 5761 cctttttttc tgcgcgtaat ctgctgcttg caaacaaaaa aaccaccgct accagcggtg 5821 gtttgtttgc cggatcaaga gctaccaact ctttttccga aggtaactgg cttcagcaga 5881 gcgcagatac caaatactgt tcttctagtg tagccgtagt taggccacca cttcaagaac 5941 tctgtagcac cgcctacata cctcgctctg ctaatcctgt taccagtggc tgctgccagt 6001 ggcgataagt cgtgtcttac cgggttggac tcaagacgat agttaccgga taaggcgcag 6061 cggtcgggct gaacgggggg ttcgtgcaca cagcccagct tggagcgaac gacctacacc 6121 gaactgagat acctacagcg tgagctatga gaaagcgcca cgcttcccga agggagaaag 6181 gcggacaggt atccggtaag cggcagggtc ggaacaggag agcgcacgag ggagcttcca 6241 gggggaaacg cctggtatct ttatagtcct gtcgggtttc gccacctctg acttgagcgt 6301 cgatttttgt gatgctcgtc aggggggcgg agcctatgga aaaacgccag caacgcggcc 6361 tttttacggt tcctggcctt ttgctggcct tttgctcaca tg //