LOCUS AAV2_hSyn_mSOG_VAM 6071 bp ds-DNA circular 26-JUL-2013 DEFINITION . ACCESSION VERSION SOURCE . ORGANISM . COMMENT COMMENT ApEinfo:methylated:1 FEATURES Location/Qualifiers misc_feature 570..1041 /label=hSyn1 promoter /ApEinfo_fwdcolor=#a3ff98 /ApEinfo_revcolor=green misc_feature 1068..1385 /label=miniSOG /ApEinfo_fwdcolor=#ff8000 /ApEinfo_revcolor=green misc_feature 1059..1064 /label=BamHI /ApEinfo_fwdcolor=#f5ff7b /ApEinfo_revcolor=green misc_feature 2568..2573 /label=HindIII /ApEinfo_fwdcolor=#fffba2 /ApEinfo_revcolor=green misc_feature 2574..3178 /label=WPRE /ApEinfo_fwdcolor=#47ff46 /ApEinfo_revcolor=green misc_feature 1785..1838 /vntifkey="21" /label=T2A /ApEinfo_fwdcolor=#ff8000 /ApEinfo_revcolor=green misc_feature 4393..5252 /label=Amp /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=green misc_feature 1764..1784 /vntifkey="21" /label=GSG\linker /ApEinfo_fwdcolor=#ff8000 /ApEinfo_revcolor=green misc_feature 3217..3429 /label=SV40 polyA /ApEinfo_fwdcolor=#996633 /ApEinfo_revcolor=green misc_feature 378..509 /label=5'ITR /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=green CDS 1845..2555 /vntifkey="4" /label=mCherry /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink misc_feature 3500..3630 /label=3' ITR /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=green misc_feature 3812..4129 /label=f1 origin /ApEinfo_fwdcolor=#ff8000 /ApEinfo_revcolor=green misc_feature 1386..1409 /label=C-term linker /ApEinfo_fwdcolor=#ffff00 /ApEinfo_revcolor=green misc_feature 1410..1757 /label=Vamp2 /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=green misc_feature 1758..1763 /label=NheI /ApEinfo_fwdcolor=#996633 /ApEinfo_revcolor=green misc_feature 1051..1056 /label=NheI(1) /ApEinfo_label=NheI /ApEinfo_fwdcolor=#996633 /ApEinfo_revcolor=green misc_feature 1839..1844 /label=BsiWI /ApEinfo_fwdcolor=#996633 /ApEinfo_revcolor=green ORIGIN 1 ttctttcctg cgttatcccc tgattctgtg gataaccgta ttaccgcctt tgagtgagct 61 gataccgctc gccgcagccg aacgaccgag cgcagcgagt cagtgagcga ggaagcggaa 121 gagcgcccaa tacgcaaacc gcctctcccc gcgcgttggc cgattcatta atgcagctgg 181 cacgacaggt ttcccgactg gaaagcgggc agtgagcgca acgcaattaa tgtgagttag 241 ctcactcatt aggcacccca ggctttacac tttatgcttc cggctcgtat gttgtgtgga 301 attgtgagcg gataacaatt tcacacagga aacagctatg accatgatta cgccagattt 361 aattaaggcc ttaattaggc tgcgcgctcg ctcgctcact gaggccgccc gggcaaagcc 421 cgggcgtcgg gcgacctttg gtcgcccggc ctcagtgagc gagcgagcgc gcagagaggg 481 agtggccaac tccatcacta ggggttcctt gtagttaatg attaacccgc catgctactt 541 atctacgtag ccatgctcta ggaAGATCTc tgcagagggc cctgcgtatg agtgcaagtg 601 ggttttagga ccaggatgag gcggggtggg ggtgcctacc tgacgaccga ccccacccac 661 tggacaagca cccaaccccc attccccaaa ttgcgcatcc cctatcagag agggggaggg 721 gaaacaggat gcggcgaggc gcgtgcgcac tgccagcttc agcaccgcgg acagtgcctt 781 cgcccccgcc tggcggcgcg cgccaccgcc gcctcagcac tgaaggcgcg ctgacgtcac 841 tcgccggtcc cccgcaaact ccccttcccg gccaccttgg tcgcgtccgc gccgccgccg 901 gcccagccgg accgcaccac gcgaggcgcg agataggggg gcacgggcgc gaccatctgc 961 gctgcggcgc cggcgactca gcgctgcctc agtctgcggt gggcagcgga ggagtcgtgt 1021 cgtgcctgag agcgcagtcg aattcaagct gctagcaagg atccggtATg GAGAAAAGTT 1081 TCGTGATAAc TGATCCACGG CTGCCAGACA ATCCCATCAT CTTCGCATCC GATggCTTCC 1141 TGGAGCTGAC CGAGTATTCC AGAGAGGAGA TCCTGGGCCG CAATGgCCGC TTTCTGCAGG 1201 GACCAGAGAC AGACCAGGCC ACAGTGCAGA AGATTCGCGA TGCCATTAGA GATCAGCGCG 1261 AGATTACCGT GCAGCTGATA AACTACACAA AAAGCGGGAA GAAATTCTGG AACCTCcTgC 1321 ACCTCCAGCC CATGAGGGAC CAGAAGGGTG AGCTCCAGTA TTTCATCGGA GTGCAGCTGG 1381 ATGGATCAGG AGGAGGCTCA GGAGGAGGAA TGTCGGCTAC CGCTGCCACC GTCCCGCCTG 1441 CCGCCCCGGC CGGCGAGGGT GGCCCCCCTG CACCTCCTCC AAACCTTACT AGTAACAGGA 1501 GACTGCAGCA GACCCAGGCC CAGGTGGATG AGGTGGTGGA CATCATGAGG GTGAATGTGG 1561 ACAAGGTCCT GGAGCGGGAC CAGAAGTTGT CGGAGCTGGA TGACCGTGCA GATGCCCTCC 1621 AGGCAGGGGC CTCCCAGTTT GAAACAAGTG CAGCCAAGCT CAAGCGCAAA TACTGGTGGA 1681 AAAACCTCAA GATGATGATC ATCTTGGGAG TGATCTGCGC CATCATCCTC ATCATCATCA 1741 TCGTTTACTT CAGCACTgct agcggaggtg gatctggtgg cggtgagggc agaggaagtc 1801 ttctaacatg cggtgacgtg gaggagaatc ccggccctcg tacgatggtg agcaagggcg 1861 aggaggataa catggccatc atcaaggagt tcatgcgctt caaggtgcac atggagggct 1921 ccgtgaacgg ccacgagttc gagatcgagg gcgagggcga gggccgcccc tacgagggca 1981 cccagaccgc caagctgaag gtgaccaagg gtggccccct gcccttcgcc tgggacatcc 2041 tgtcccctca gttcatgtac ggctccaagg cctacgtgaa gcaccccgcc gacatccccg 2101 actacttgaa gctgtccttc cccgagggct tcaagtggga gcgcgtgatg aacttcgagg 2161 acggcggcgt ggtgaccgtg acccaggact cctccctgca ggacggcgag ttcatctaca 2221 aggtgaagct gcgcggcacc aacttcccct ccgacggccc cgtaatgcag aagaagacca 2281 tgggctggga ggcctcctcc gagcggatgt accccgagga cggcgccctg aagggcgaga 2341 tcaagcagag gctgaagctg aaggacggcg gccactacga cgctgaggtc aagaccacct 2401 acaaggccaa gaagcccgtg cagctgcccg gcgcctacaa cgtcaacatc aagttggaca 2461 tcacctccca caacgaggac tacaccatcg tggaacagta cgaacgcgcc gagggccgcc 2521 actccaccgg cggcatggac gagctgtaca agtaagaatt cgatatcAAG CTTatcgata 2581 atcaacctct ggattacaaa atttgtgaaa gattgactgg tattcttaac tatgttgctc 2641 cttttacgct atgtggatac gctgctttaa tgcctttgta tcatgctatt gcttcccgta 2701 tggctttcat tttctcctcc ttgtataaat cctggttgct gtctctttat gaggagttgt 2761 ggcccgttgt caggcaacgt ggcgtggtgt gcactgtgtt tgctgacgca acccccactg 2821 gttggggcat tgccaccacc tgtcagctcc tttccgggac tttcgctttc cccctcccta 2881 ttgccacggc ggaactcatc gccgcctgcc ttgcccgctg ctggacaggg gctcggctgt 2941 tgggcactga caattccgtg gtgttgtcgg ggaaatcatc gtcctttcct tggctgctcg 3001 cctgtgttgc cacctggatt ctgcgcggga cgtccttctg ctacgtccct tcggccctca 3061 atccagcgga ccttccttcc cgcggcctgc tgccggctct gcggcctctt ccgcgtcttc 3121 gccttcgccc tcagacgagt cggatctccc tttgggccgc ctccccgcat cgataccgtc 3181 gacctcgacc cgggcggccg cttcgagcag acatgataag atacattgat gagtttggac 3241 aaaccacaac tagaatgcag tgaaaaaaat gctttatttg tgaaatttgt gatgctattg 3301 ctttatttgt aaccattata agctgcaata aacaagttaa caacaacaat tgcattcatt 3361 ttatgtttca ggttcagggg gagatgtggg aggtttttta aagcaagtaa aacctctaca 3421 aatgtggtaa aatcgataag gatcttccta gagcatggct acgtagataa gtagcatggc 3481 gggttaatca ttaactacaa ggaaccccta gtgatggagt tggccactcc ctctctgcgc 3541 gctcgctcgc tcactgaggc cgggcgacca aaggtcgccc gacgcccggg ctttgcccgg 3601 gcggcctcag tgagcgagcg agcgcgcagc cttaattaac ctaattcact ggccgtcgtt 3661 ttacaacgtc gtgactggga aaaccctggc gttacccaac ttaatcgcct tgcagcacat 3721 ccccctttcg ccagctggcg taatagcgaa gaggcccgca ccgatcgccc ttcccaacag 3781 ttgcgcagcc tgaatggcga atgggacgcg ccctgtagcg gcgcattaag cgcggcgggt 3841 gtggtggtta cgcgcagcgt gaccgctaca cttgccagcg ccctagcgcc cgctcctttc 3901 gctttcttcc cttcctttct cgccacgttc gccggctttc cccgtcaagc tctaaatcgg 3961 gggctccctt tagggttccg atttagtgct ttacggcacc tcgaccccaa aaaacttgat 4021 tagggtgatg gttcacgtag tgggccatcg ccctgataga cggtttttcg ccctttgacg 4081 ttggagtcca cgttctttaa tagtggactc ttgttccaaa ctggaacaac actcaaccct 4141 atctcggtct attcttttga tttataaggg attttgccga tttcggccta ttggttaaaa 4201 aatgagctga tttaacaaaa atttaacgcg aattttaaca aaatattaac gcttacaatt 4261 taggtggcac ttttcgggga aatgtgcgcg gaacccctat ttgtttattt ttctaaatac 4321 attcaaatat gtatccgctc atgagacaat aaccctgata aatgcttcaa taatattgaa 4381 aaaggaagag tatgagtatt caacatttcc gtgtcgccct tattcccttt tttgcggcat 4441 tttgccttcc tgtttttgct cacccagaaa cgctggtgaa agtaaaagat gctgaagatc 4501 agttgggtgc acgagtgggt tacatcgaac tggatctcaa cagcggtaag atccttgaga 4561 gttttcgccc cgaagaacgt tttccaatga tgagcacttt taaagttctg ctatgtggcg 4621 cggtattatc ccgtattgac gccgggcaag agcaactcgg tcgccgcata cactattctc 4681 agaatgactt ggttgagtac tcaccagtca cagaaaagca tcttacggat ggcatgacag 4741 taagagaatt atgcagtgct gccataacca tgagtgataa cactgcggcc aacttacttc 4801 tgacaacgat cggaggaccg aaggagctaa ccgctttttt gcacaacatg ggggatcatg 4861 taactcgcct tgatcgttgg gaaccggagc tgaatgaagc cataccaaac gacgagcgtg 4921 acaccacgat gcctgtagca atggcaacaa cgttgcgcaa actattaact ggcgaactac 4981 ttactctagc ttcccggcaa caattaatag actggatgga ggcggataaa gttgcaggac 5041 cacttctgcg ctcggccctt ccggctggct ggtttattgc tgataaatct ggagccggtg 5101 agcgtgggtc tcgcggtatc attgcagcac tggggccaga tggtaagccc tcccgtatcg 5161 tagttatcta cacgacgggg agtcaggcaa ctatggatga acgaaataga cagatcgctg 5221 agataggtgc ctcactgatt aagcattggt aactgtcaga ccaagtttac tcatatatac 5281 tttagattga tttaaaactt catttttaat ttaaaaggat ctaggtgaag atcctttttg 5341 ataatctcat gaccaaaatc ccttaacgtg agttttcgtt ccactgagcg tcagaccccg 5401 tagaaaagat caaaggatct tcttgagatc ctttttttct gcgcgtaatc tgctgcttgc 5461 aaacaaaaaa accaccgcta ccagcggtgg tttgtttgcc ggatcaagag ctaccaactc 5521 tttttccgaa ggtaactggc ttcagcagag cgcagatacc aaatactgtt cttctagtgt 5581 agccgtagtt aggccaccac ttcaagaact ctgtagcacc gcctacatac ctcgctctgc 5641 taatcctgtt accagtggct gctgccagtg gcgataagtc gtgtcttacc gggttggact 5701 caagacgata gttaccggat aaggcgcagc ggtcgggctg aacggggggt tcgtgcacac 5761 agcccagctt ggagcgaacg acctacaccg aactgagata cctacagcgt gagctatgag 5821 aaagcgccac gcttcccgaa gggagaaagg cggacaggta tccggtaagc ggcagggtcg 5881 gaacaggaga gcgcacgagg gagcttccag ggggaaacgc ctggtatctt tatagtcctg 5941 tcgggtttcg ccacctctga cttgagcgtc gatttttgtg atgctcgtca ggggggcgga 6001 gcctatggaa aaacgccagc aacgcggcct ttttacggtt cctggccttt tgctggcctt 6061 ttgctcacat g //